miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|145872238|gb|ES378326.1|ES378326 GTGTGCGGTGCGCGCTCGAGCTATTGAACAGTTTTCGCTAAAGGAGACACACCTCGAGCCGAAGAAGTGTTCCGGAGACG
CACTAATGGTGCTCGAACCACTTTGTCATTTTAAATAATAAACGAGCAGAGTTGGGAAAGTCGCGTCGGGTTCTACTTTG
AGATCCGTGTGGTCCTGGAAGGAGTGTCATGGCAGAACCGGACTACCTGGAGGGAGACTGTGATGAGCTCATCCAACCCA
AAAAGCTGATTAATCCAGTCAAGAGCTCCCGAAACCACCAGGACCTACACAGAGAGCTTATTATGAACCAAAAGAGGGGC
CTTGCTCCTCAGAACAAGCCAGAGCTCCAGAAGGTTCTAGAGAAGAGGAAGAGAGAACAAGTTATCAAGGCCCAAAAGGA
GGAGCAGGAGGCTCACAAGAAGAGAAGCGACCTGGAAATAGAGCTCATGAAAAGACAACAGAAACTAGAGCAGCTTGAAC
TGGAGCAGCAGAAAATTCAGGAGGAGCAGGAAAACACCCCTGAGTTTGTGAAGATGAAGGGCAACCTGCGCCGCACCAAG
CAGGAAGCCGGCGGTGAGGAGCAAGCCACCTAAAATCCAGCCAGGGTGTCTGGGTCTGGCTGACTGAGAAGCCAAGGAGT
GTGTGTTGTGTCTATGGTAACACGGTGGTGACCTGACCAAGATGAGCCTCTTGGCGTTCCTTTACCCAGCTGTTCCTTCC
TGCAGCGAGGAGAGAGACTTTAGAGACTAAAGACCCCCCACCCAACCCCTTCTTTCTCCCTGCAATGGACCGCCAGCACT
CGCACCTGTCCAGCAGTACGCAGCACCCCCACTCACAGGAGGCACCTAACAGACATGTTACACGCTTTTCAACACGGGCC
ACCAAGCTTCCAATGAGCTTTAGTGGAGGAAATGAACCAAACCCAATCTGTCTTTGCTCTTTTTTTCCTTTGCGAGCTGT
CGTTTTTATTTCCTGTTATCAGTGTTGTCATTATTGTTTTTGTTGCTCATATTCACAATCATAGAAAAAAATCAAAAAGT
GGACACTGGATGGACTTTTAAAGCTGTGTAAAATAAAAGCCAAACAAATGTGCTTTTTGTTATTTATGTTGGTAGCTTTT
AGCCCAGGTGTAGGGGAGGACACTTTTAGTCATTTTGTGTTTTATTTTGTTTTACAGCATAGCATATAAAGCCAGAACAG
GACAAAGGGAGTGCGAGGTTGTGTGAAAATATGCTTTGTTTTATTTTATTTTATTTTTTTAAATGTACATGATATTTCCT
CAGCTAATGCAATTTTAAGCAATAGTAGAACTCCCAGGCATGAGAGGGATTTTTTCTTTATATATTTTATTGTTTTGTAT
GAAAAAATGTGTTACTTAATAAATAATTTACATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA




Most similar to sp|Q3TGF2|F107B_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3TGF2|F107B_MOUSE Protein FAM107B OS=Mus musculus GN=Fam107b
           PE=2 SV=2
          Length = 131

 Score =  141 bits (355), Expect = 1e-32
 Identities = 76/133 (57%), Positives = 88/133 (66%)
 Frame = +3

Query: 189 MAEPDYLEGDCDELIQPKKLINPVKSSRNHQDLHRELIMNQKRGLAPQNKPELQKVLEKR 368
           MAEPDY+E D  ELI+P+KLINPVKSSRNHQDLHREL+MNQKRGLAPQNKPELQKV+EKR
Sbjct: 1   MAEPDYIEDDNPELIRPQKLINPVKSSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKR 60

Query: 369 KREQVIXXXXXXXXXXXXRSDLEIXXXXXXXXXXXXXXXXXXXXXXXXNTPEFVKMKGNL 548
           +R+QVI            +SDLEI                        N PEFVK+KGNL
Sbjct: 61  RRDQVI--KQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNL 118

Query: 549 RRTKQEAGGEEQA 587
           RRT QE    +++
Sbjct: 119 RRTGQEVAQAQES 131